Rcollectl

This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see Rcollectl.

Help use collectl with R in Linux, to measure resource consumption in R processes

Bioconductor version: 3.19

Provide functions to obtain instrumentation data on processes in a unix environment. Parse output of a collectl run. Vizualize aspects of system usage over time, with annotation.

Author: Vincent Carey [aut, cre] , Yubo Cheng [aut]

Maintainer: Vincent Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("Rcollectl")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("Rcollectl")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rcollectl")

Rcollectl HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Infrastructure, Software

Version 1.4.0

In Bioconductor since BioC 3.17 (R-4.3) (1.5 years)

License Artistic-2.0

Depends

Imports utils, ggplot2, lubridate, processx

System Requirements collectl

URL https://github.com/vjcitn/Rcollectl

Bug Reports https://support.bioconductor.org/t/Rcollectl

Suggests knitr, BiocStyle, knitcitations, sessioninfo, rmarkdown, testthat, covr

Linking To

Enhances

Depends On Me

Imports Me

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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rcollectl_1.4.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/Rcollectl

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rcollectl

Bioc Package Browser https://code.bioconductor.org/browse/Rcollectl/

Package Short Url https://bioconductor.org/packages/Rcollectl/

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