HumanTranscriptomeCompendium

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.19 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see HumanTranscriptomeCompendium.

Tools to work with a Compendium of 181000 human transcriptome sequencing studies

Installation

To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("HumanTranscriptomeCompendium")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HumanTranscriptomeCompendium")

Details

See More

Suggests knitr, BiocStyle, beeswarm, tximportData, DT, tximport, dplyr, magrittr, BiocFileCache, testthat, rhdf5client, rmarkdown

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Follow Installation instructions to use this package in your R session.