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raer

This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see raer.

RNA editing tools in R


Bioconductor version: 3.18

Toolkit for identification and statistical testing of RNA editing signals from within R. Provides support for identifying sites from bulk-RNA and single cell RNA-seq datasets, and general methods for extraction of allelic read counts from alignment files. Facilitates annotation and exploratory analysis of editing signals using Bioconductor packages and resources.

Author: Kent Riemondy [aut, cre] , Kristen Wells-Wrasman [aut] , Ryan Sheridan [ctb] , Jay Hesselberth [ctb] , RNA Bioscience Initiative [cph, fnd]

Maintainer: Kent Riemondy <kent.riemondy at gmail.com>

Citation (from within R, enter citation("raer")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("raer")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("raer")
Introduction HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

Version 1.0.2
In Bioconductor since BioC 3.18 (R-4.3) (0.5 years)
License MIT + file LICENSE
Depends
System Requirements GNU make
See More
Linking To Rhtslib
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package raer_1.0.2.tar.gz
Windows Binary raer_1.0.2.zip
macOS Binary (x86_64) raer_1.0.2.tgz
macOS Binary (arm64) raer_1.0.2.tgz
Source Repository git clone https://git.bioconductor.org/packages/raer
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/raer
Package Downloads Report Download Stats
Old Source Packages for BioC 3.18 Source Archive

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