beadarraySNP

This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see beadarraySNP.

Normalization and reporting of Illumina SNP bead arrays

Bioconductor version: 3.18

Importing data from Illumina SNP experiments and performing copy number calculations and reports.

Author: Jan Oosting

Maintainer: Jan Oosting <j.oosting at lumc.nl>

Citation (from within R, enter citation("beadarraySNP")):

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("beadarraySNP")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("beadarraySNP")

beadarraySNP.pdf PDF R Script

Reference Manual PDF

Version 1.68.0

In Bioconductor since BioC 1.9 (R-2.4) (17.5 years)

License GPL-2

Depends methods, Biobase(>= 2.14), quantsmooth

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Follow Installation instructions to use this package in your R session.

Windows Binary beadarraySNP_1.68.0.zip (64-bit only)

macOS Binary (x86_64) beadarraySNP_1.68.0.tgz

macOS Binary (arm64) beadarraySNP_1.68.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/beadarraySNP

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/beadarraySNP

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