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ExperimentSubset
This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see ExperimentSubset.
Manages subsets of data with Bioconductor Experiment objects
Bioconductor version: 3.18
Experiment objects such as the SummarizedExperiment or SingleCellExperiment are data containers for one or more matrix-like assays along with the associated row and column data. Often only a subset of the original data is needed for down-stream analysis. For example, filtering out poor quality samples will require excluding some columns before analysis. The ExperimentSubset object is a container to efficiently manage different subsets of the same data without having to make separate objects for each new subset.
Author: Irzam Sarfraz [aut, cre] , Muhammad Asif [aut, ths] , Joshua D. Campbell [aut]
Maintainer: Irzam Sarfraz <irzam9095 at gmail.com>
citation("ExperimentSubset")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ExperimentSubset")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ExperimentSubset")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.