alternativeSplicingEvents.hg38

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see alternativeSplicingEvents.hg38.

Alternative splicing event annotation for Human (hg38)

DOI: 10.18129/B9.bioc.alternativeSplicingEvents.hg38

Bioconductor version: 3.17

Data frame containing alternative splicing events. The splicing events were compiled from the annotation files used by the alternative splicing quantification tools MISO, VAST-TOOLS, SUPPA and rMATS.

Author: Nuno Agostinho

Maintainer: Nuno Agostinho <nunodanielagostinho at gmail.com>

Citation (from within R, enter citation("alternativeSplicingEvents.hg38")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("alternativeSplicingEvents.hg38")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews AnnotationData, AnnotationHub

Version 1.1.0

License MIT + file LICENSE

Depends

Imports AnnotationHub

System Requirements

URL https://github.com/nuno-agostinho/alternativeSplicingEvents.hg38

Bug Reports https://github.com/nuno-agostinho/alternativeSplicingEvents.hg38/issues

Suggests dplyr, GenomicRanges, S4Vectors

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package alternativeSplicingEvents.hg38_1.1.0.tar.gz

Windows Binary

macOS Binary (x86_64)

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Package Short Url https://bioconductor.org/packages/alternativeSplicingEvents.hg38/

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