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geneRecommender
This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see geneRecommender.
A gene recommender algorithm to identify genes coexpressed with a query set of genes
Bioconductor version: 3.17
This package contains a targeted clustering algorithm for the analysis of microarray data. The algorithm can aid in the discovery of new genes with similar functions to a given list of genes already known to have closely related functions.
Author: Gregory J. Hather <ghather at stat.berkeley.edu>, with contributions from Art B. Owen <art at stat.stanford.edu> and Terence P. Speed <terry at stat.berkeley.edu>
Maintainer: Greg Hather <ghather at stat.berkeley.edu>
citation("geneRecommender")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("geneRecommender")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("geneRecommender")
Details
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Follow Installation instructions to use this package in your R session.