crisprVerse

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see crisprVerse.

Easily install and load the crisprVerse ecosystem for CRISPR gRNA design

Bioconductor version: 3.17

The crisprVerse is a modular ecosystem of R packages developed for the design and manipulation of CRISPR guide RNAs (gRNAs). All packages share a common language and design principles. This package is designed to make it easy to install and load the crisprVerse packages in a single step. To learn more about the crisprVerse, visit .

Author: Jean-Philippe Fortin [aut, cre]

Maintainer: Jean-Philippe Fortin <fortin946 at gmail.com>

Citation (from within R, enter citation("crisprVerse")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("crisprVerse")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("crisprVerse")

crisprVerse HTML R Script

Reference Manual PDF

NEWS Text

LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CRISPR, FunctionalGenomics, GeneTarget, Software

Version 1.2.0

In Bioconductor since BioC 3.16 (R-4.2) (1.5 years)

License MIT + file LICENSE

Depends R (>= 4.2.0)

Imports BiocManager, cli, crisprBase, crisprBowtie, crisprScore, crisprScoreData, crisprDesign, crisprViz, rlang, tools, utils

System Requirements

URL https://github.com/crisprVerse/crisprVerse

Bug Reports https://github.com/crisprVerse/crisprVerse/issues

Suggests BiocStyle, knitr, testthat

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package crisprVerse_1.2.0.tar.gz

Windows Binary crisprVerse_1.2.0.zip

macOS Binary (x86_64) crisprVerse_1.2.0.tgz

macOS Binary (arm64) crisprVerse_1.2.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/crisprVerse

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/crisprVerse

Bioc Package Browser https://code.bioconductor.org/browse/crisprVerse/

Package Short Url https://bioconductor.org/packages/crisprVerse/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.17 Source Archive