biocthis

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see biocthis.

Automate package and project setup for Bioconductor packages

Bioconductor version: 3.17

This package expands the usethis package with the goal of helping automate the process of creating R packages for Bioconductor or making them Bioconductor-friendly.

Author: Leonardo Collado-Torres [aut, cre] , Marcel Ramos [ctb]

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("biocthis")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("biocthis")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biocthis")

biocthis developer notes HTML R Script

Introduction to biocthis HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ReportWriting, Software

Version 1.10.3

In Bioconductor since BioC 3.12 (R-4.0) (3.5 years)

License Artistic-2.0

Depends

Imports BiocManager, fs, glue, rlang, styler, usethis (>= 2.0.1)

System Requirements

URL https://github.com/lcolladotor/biocthis

Bug Reports https://support.bioconductor.org/tag/biocthis

Suggests BiocStyle, covr, devtools, knitr, pkgdown, RefManageR, rmarkdown, sessioninfo, testthat, utils

Linking To

Enhances

Depends On Me

Imports Me HubPub

Suggests Me tripr

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package biocthis_1.10.3.tar.gz

Windows Binary biocthis_1.10.3.zip

macOS Binary (x86_64) biocthis_1.10.3.tgz

macOS Binary (arm64) biocthis_1.10.3.tgz

Source Repository git clone https://git.bioconductor.org/packages/biocthis

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/biocthis

Bioc Package Browser https://code.bioconductor.org/browse/biocthis/

Package Short Url https://bioconductor.org/packages/biocthis/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.17 Source Archive