zebrafishRNASeq

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see zebrafishRNASeq.

Zebrafish RNA-Seq Experimental Data from Ferreira et al. (2014)

Bioconductor version: 3.16

Gene-level read counts from RNA-Seq for gallein-treated and control zebrafish.

Author: Davide Risso

Maintainer: Davide Risso <risso.davide at gmail.com>

Citation (from within R, enter citation("zebrafishRNASeq")):

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("zebrafishRNASeq")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("zebrafishRNASeq")

Pre-Processing for the Zebrafish RNA-Seq Gene-Level Counts PDF R Script

Reference Manual PDF

Version 1.18.0

License GPL

Depends R (>= 2.10)

Imports

System Requirements

URL

Suggests BiocStyle, knitr

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me RUVSeq, sva

Links To Me

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Follow Installation instructions to use this package in your R session.

Windows Binary

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/zebrafishRNASeq

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/zebrafishRNASeq

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