derfinderData

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see derfinderData.

Processed BigWigs from BrainSpan for examples

Bioconductor version: 3.16

Processed 22 samples from BrainSpan keeping only the information for chromosome 21. Data is stored in the BigWig format and is used for examples in other packages.

Author: Leonardo Collado-Torres [aut, cre] , Andrew Jaffe [aut] , Jeffrey Leek [aut, ths]

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("derfinderData")):

Installation

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("derfinderData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("derfinderData")

Introduction to derfinderData HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, Homo_sapiens_Data, RNASeqData

Version 2.16.0

License Artistic-2.0

Depends R (>= 3.5.0)

Imports

System Requirements

URL https://github.com/leekgroup/derfinderData

Bug Reports https://github.com/leekgroup/derfinderData/issues

Suggests sessioninfo, knitr (>= 1.6), RefManageR, rmarkdown (>= 0.3.3), BiocStyle

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me derfinder, derfinderPlot

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package derfinderData_2.16.0.tar.gz

Windows Binary

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/derfinderData

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/derfinderData

Package Short Url https://bioconductor.org/packages/derfinderData/

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