cMap2data

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see cMap2data.

Connectivity Map (version 2) Data

Bioconductor version: 3.16

Data package which provides default drug profiles for the DrugVsDisease package as well as associated gene lists and data clusters used by the DrugVsDisease package.

Author: C. Pacini

Maintainer: J. Saez-Rodriguez <saezrodriguez at ebi.ac.uk>

Citation (from within R, enter citation("cMap2data")):

Installation

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("cMap2data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cMap2data")

cMap2data PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData

Version 1.34.0

License GPL-3

Depends R (>= 2.10)

Imports

System Requirements

URL

Suggests

Linking To

Enhances

Depends On Me DrugVsDisease

Imports Me

Suggests Me

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package cMap2data_1.34.0.tar.gz

Windows Binary

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/cMap2data

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/cMap2data

Package Short Url https://bioconductor.org/packages/cMap2data/

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