TCGAMethylation450k

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see TCGAMethylation450k.

The Cancer Genome Atlas Illumina 450k methylation example data

DOI: 10.18129/B9.bioc.TCGAMethylation450k

Bioconductor version: 3.16

The Cancer Genome Atlas (TCGA) is applying genomics technologies to over 20 different types of cancer. This package contains a small set of 450k array data in idat format.

Author: Sean Davis

Maintainer: Sean Davis <sdavis2 at mail.nih.gov>

Citation (from within R, enter citation("TCGAMethylation450k")):

Installation

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("TCGAMethylation450k")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CancerData, ExperimentData, Genome, MethylationArrayData

Version 1.34.0

License GPL-2

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Depends On Me

Imports Me

Suggests Me methylumi

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Follow Installation instructions to use this package in your R session.

Source Package TCGAMethylation450k_1.34.0.tar.gz

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Source Repository git clone https://git.bioconductor.org/packages/TCGAMethylation450k

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TCGAMethylation450k

Package Short Url https://bioconductor.org/packages/TCGAMethylation450k/

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