RNAinteractMAPK

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see RNAinteractMAPK.

Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Bioconductor version: 3.16

This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.

Author: Bernd Fischer [aut], Wolfgang Huber [ctb], Mike Smith [cre]

Maintainer: Mike Smith <mike.smith at embl.de>

Citation (from within R, enter citation("RNAinteractMAPK")):

Installation

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("RNAinteractMAPK")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RNAinteractMAPK")

RNAinteractMAPK PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CellCulture, Drosophila_melanogaster_Data, ExperimentData, MicrotitrePlateAssayData

Version 1.36.0

License Artistic-2.0

Depends R (>= 2.12.0), sparseLDA, RNAinteract

Imports grid, gdata, MASS, genefilter, methods, fields, utils, lattice, Biobase

System Requirements

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RNAinteractMAPK_1.36.0.tar.gz

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macOS Binary (x86_64)

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Source Repository git clone https://git.bioconductor.org/packages/RNAinteractMAPK

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RNAinteractMAPK

Package Short Url https://bioconductor.org/packages/RNAinteractMAPK/

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