FoldGO

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see FoldGO.

Package for Fold-specific GO Terms Recognition

Bioconductor version: 3.16

FoldGO is a package designed to annotate gene sets derived from expression experiments and identify fold-change-specific GO terms.

Author: Daniil Wiebe <daniil.wiebe at gmail.com> [aut, cre]

Maintainer: Daniil Wiebe <daniil.wiebe at gmail.com>

Citation (from within R, enter citation("FoldGO")):

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("FoldGO")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FoldGO")

FoldGO: a tool for fold-change-specific functional enrichment analysis HTML R Script

Reference Manual PDF

NEWS Text

Version 1.16.0

In Bioconductor since BioC 3.8 (R-3.5) (5.5 years)

License GPL-3

Depends R (>= 4.0)

Imports topGO(>= 2.30.1), ggplot2 (>= 2.2.1), tidyr (>= 0.8.0), stats, methods

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Suggests knitr, rmarkdown, devtools, kableExtra

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Follow Installation instructions to use this package in your R session.

Source Package FoldGO_1.16.0.tar.gz

Windows Binary FoldGO_1.16.0.zip

macOS Binary (x86_64) FoldGO_1.16.0.tgz

macOS Binary (arm64) FoldGO_1.16.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/FoldGO

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/FoldGO

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Old Source Packages for BioC 3.16 Source Archive