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AffyRNADegradation
This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see AffyRNADegradation.
Analyze and correct probe positional bias in microarray data due to RNA degradation
Bioconductor version: 3.16
The package helps with the assessment and correction of RNA degradation effects in Affymetrix 3' expression arrays. The parameter d gives a robust and accurate measure of RNA integrity. The correction removes the probe positional bias, and thus improves comparability of samples that are affected by RNA degradation.
Author: Mario Fasold
Maintainer: Mario Fasold <fasold at izbi.uni-leipzig.de>
citation("AffyRNADegradation")):
Installation
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("AffyRNADegradation")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("AffyRNADegradation")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.