prebsdata

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see prebsdata.

Data for 'prebs' package

Bioconductor version: 3.15

This package contains data required to run examples in 'prebs' package. The data files include: 1) Small sample bam files for demonstration purposes 2) Probe sequence mappings for Custom CDF (taken from http://brainarray.mbni.med.umich.edu/brainarray/Database/CustomCDF/genomic_curated_CDF.asp) 3) Probe sequence mappings for manufacturer's CDF (manually created using bowtie)

Author: Karolis Uziela and Antti Honkela

Maintainer: Karolis Uziela <karolis.uziela at scilifelab.se>

Citation (from within R, enter citation("prebsdata")):

Installation

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("prebsdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("prebsdata")

prebsdata User Guide PDF

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, RNASeqData, SequencingData

Version 1.32.0

License Artistic-2.0

Depends R (>= 2.14.0)

Imports

System Requirements

URL

Suggests

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me prebs, SigFuge

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package prebsdata_1.32.0.tar.gz

Windows Binary

macOS Binary (x86_64)

Source Repository git clone https://git.bioconductor.org/packages/prebsdata

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/prebsdata

Package Short Url https://bioconductor.org/packages/prebsdata/

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