ReactomeGSA.data

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see ReactomeGSA.data.

Companion data package for the ReactomeGSA package

Bioconductor version: 3.15

Companion data sets to showcase the functionality of the ReactomeGSA package. This package contains proteomics and RNA-seq data of the melanoma B-cell induction study by Griss et al. and scRNA-seq data from Jerby-Arnon et al.

Author: Johannes Griss [aut, cre]

Maintainer: Johannes Griss <johannes.griss at meduniwien.ac.at>

Citation (from within R, enter citation("ReactomeGSA.data")):

Installation

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("ReactomeGSA.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, ExpressionData, Homo_sapiens_Data, Proteome, RNASeqData

Version 1.10.0

License Artistic-2.0

Depends R (>= 3.6), limma, edgeR, ReactomeGSA, Seurat

Imports

System Requirements

URL https://github.com/reactome/ReactomeGSA.data/issues

Bug Reports https://github.com/reactome/ReactomeGSA.data

Suggests

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me ReactomeGSA

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ReactomeGSA.data_1.10.0.tar.gz

Windows Binary

macOS Binary (x86_64)

Source Repository git clone https://git.bioconductor.org/packages/ReactomeGSA.data

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ReactomeGSA.data

Package Short Url https://bioconductor.org/packages/ReactomeGSA.data/

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