diggitdata

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see diggitdata.

Example data for the diggit package

Bioconductor version: 3.14

This package provides expression profile and CNV data for glioblastoma from TCGA, and transcriptional and post-translational regulatory networks assembled with the ARACNe and MINDy algorithms, respectively.

Author: Mariano Javier Alvarez

Maintainer: Mariano Javier Alvarez <reef103 at gmail.com>

Citation (from within R, enter citation("diggitdata")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("diggitdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("diggitdata")

Using bcellViper PDF R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Cancer, ExperimentData

Version 1.26.0

License GPL (>=2)

Depends R (>= 2.14.0), Biobase, methods

Imports viper

System Requirements

URL

Suggests

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me diggit

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package diggitdata_1.26.0.tar.gz

Windows Binary

macOS 10.13 (High Sierra)

Source Repository git clone https://git.bioconductor.org/packages/diggitdata

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/diggitdata

Package Short Url https://bioconductor.org/packages/diggitdata/

Package Downloads Report Download Stats