ndexr
This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see ndexr.
NDEx R client library
Bioconductor version: 3.14
This package offers an interface to NDEx servers, e.g. the public server at http://ndexbio.org/. It can retrieve and save networks via the API. Networks are offered as RCX object and as igraph representation.
Author: Florian Auer <florian.auer at informatik.uni-augsburg.de>, Frank Kramer <frank.kramer at informatik.uni-augsburg.de>, Alex Ishkin <aleksandr.ishkin at thomsonreuters.com>, Dexter Pratt <depratt at ucsc.edu>
Maintainer: Florian Auer <florian.auer at informatik.uni-augsburg.de>
citation("ndexr")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ndexr")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ndexr")
Details
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Follow Installation instructions to use this package in your R session.