meshr

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see meshr.

Tools for conducting enrichment analysis of MeSH

Bioconductor version: 3.14

A set of annotation maps describing the entire MeSH assembled using data from MeSH.

Author: Koki Tsuyuzaki, Itoshi Nikaido, Gota Morota

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("meshr")):

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("meshr")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("meshr")

AnnotationHub-style MeSH ORA Framework from BioC 3.14 HTML R Script

Reference Manual PDF

NEWS Text

Version 2.0.2

In Bioconductor since BioC 2.14 (R-3.1) (10 years)

License Artistic-2.0

Depends R (>= 4.1.0)

Imports markdown, rmarkdown, BiocStyle, knitr, methods, stats, utils, fdrtool, MeSHDbi, Category, S4Vectors, BiocGenerics, RSQLite

System Requirements

URL

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Depends On Me

Imports Me scTensor

Suggests Me

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Build Report Build Report

Follow Installation instructions to use this package in your R session.

Source Package meshr_2.0.2.tar.gz

Windows Binary meshr_2.0.2.zip

macOS 10.13 (High Sierra) meshr_2.0.2.tgz

Source Repository git clone https://git.bioconductor.org/packages/meshr

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/meshr

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Old Source Packages for BioC 3.14 Source Archive