gcrma

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see gcrma.

Background Adjustment Using Sequence Information

Bioconductor version: 3.14

Background adjustment using sequence information

Author: Jean(ZHIJIN) Wu, Rafael Irizarry with contributions from James MacDonald <jmacdon at med.umich.edu> Jeff Gentry

Maintainer: Z. Wu <zwu at stat.brown.edu>

Citation (from within R, enter citation("gcrma")):

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("gcrma")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gcrma")

gcrma1.2 PDF

Reference Manual PDF

NEWS Text

Version 2.66.0

In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 19 years)

License LGPL

Depends R (>= 2.6.0), affy(>= 1.23.2), graphics, methods, stats, utils

Imports Biobase, affy(>= 1.23.2), affyio(>= 1.13.3), XVector, Biostrings(>= 2.11.32), splines, BiocManager

System Requirements

URL

Suggests affydata, tools, splines, hgu95av2cdf, hgu95av2probe

Linking To

Enhances

Suggests Me panp

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Source Package gcrma_2.66.0.tar.gz

Windows Binary gcrma_2.66.0.zip

macOS 10.13 (High Sierra) gcrma_2.66.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/gcrma

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/gcrma

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Old Source Packages for BioC 3.14 Source Archive