LiquidAssociation

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see LiquidAssociation.

LiquidAssociation

Bioconductor version: 3.14

The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

Author: Yen-Yi Ho <yho at jhsph.edu>

Maintainer: Yen-Yi Ho <yho at jhsph.edu>

Citation (from within R, enter citation("LiquidAssociation")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("LiquidAssociation")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LiquidAssociation")

LiquidAssociation Vignette PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CellBiology, GeneExpression, Genetics, Network, Pathways, Software, TimeCourse

Version 1.48.0

In Bioconductor since BioC 2.5 (R-2.10) (14.5 years)

License GPL (>=3)

Depends geepack, methods, yeastCC, org.Sc.sgd.db

Imports Biobase, graphics, grDevices, methods, stats

System Requirements

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Depends On Me fastLiquidAssociation

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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package LiquidAssociation_1.48.0.tar.gz

Windows Binary LiquidAssociation_1.48.0.zip

macOS 10.13 (High Sierra) LiquidAssociation_1.48.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/LiquidAssociation

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/LiquidAssociation

Bioc Package Browser https://code.bioconductor.org/browse/LiquidAssociation/

Package Short Url https://bioconductor.org/packages/LiquidAssociation/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.14 Source Archive