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CellNOptR
This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see CellNOptR.
Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data
Bioconductor version: 3.14
This package does optimisation of boolean logic networks of signalling pathways based on a previous knowledge network and a set of data upon perturbation of the nodes in the network.
Author: T.Cokelaer, F.Eduati, A.MacNamara, S.Schrier, C.Terfve, E.Gjerga, A.Gabor
Maintainer: A.Gabor <attila.gabor at uni-heidelberg.de>
citation("CellNOptR")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CellNOptR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CellNOptR")
Details
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Follow Installation instructions to use this package in your R session.