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CancerInSilico
This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see CancerInSilico.
An R interface for computational modeling of tumor progression
Bioconductor version: 3.14
The CancerInSilico package provides an R interface for running mathematical models of tumor progresson and generating gene expression data from the results. This package has the underlying models implemented in C++ and the output and analysis features implemented in R.
Author: Thomas D. Sherman, Raymond Cheng, Elana J. Fertig
Maintainer: Thomas D. Sherman <tomsherman159 at gmail.com>, Elana J. Fertig <ejfertig at jhmi.edu>
citation("CancerInSilico")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CancerInSilico")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CancerInSilico")
Details
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Follow Installation instructions to use this package in your R session.