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BiocCheck

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see BiocCheck.

Bioconductor-specific package checks


Bioconductor version: 3.14

Executes Bioconductor-specific package checks.

Author: Bioconductor Package Maintainer [aut, cre], Lori Shepherd [aut], Daniel von Twisk [ctb], Kevin Rue [ctb], Marcel Ramos [ctb], Leonardo Collado-Torres [ctb], Federico Marini [ctb]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BiocCheck")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("BiocCheck")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocCheck")
BiocCheck: Ensuring Bioconductor package guidelines HTML R Script
Reference Manual PDF
NEWS Text

Details

Version 1.30.0
In Bioconductor since BioC 2.14 (R-3.1) (10 years)
License Artistic-2.0
Depends R (>= 3.5.0)
Imports biocViews(>= 1.33.7), BiocManager, stringdist, graph, httr, tools, optparse, codetools, methods, utils, knitr
System Requirements
See More
Suggests RUnit, BiocGenerics, Biobase, RJSONIO, rmarkdown, devtools (>= 1.4.1), usethis, BiocStyle
Linking To
Enhances codetoolsBioC
Depends On Me
Imports Me AnnotationHubData
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BiocCheck_1.30.0.tar.gz
Windows Binary BiocCheck_1.30.0.zip
macOS 10.13 (High Sierra) BiocCheck_1.30.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/BiocCheck
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BiocCheck
Package Downloads Report Download Stats
Old Source Packages for BioC 3.14 Source Archive

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