BAGS

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see BAGS.

A Bayesian Approach for Geneset Selection

Bioconductor version: 3.14

R package providing functions to perform geneset significance analysis over simple cross-sectional data between 2 and 5 phenotypes of interest.

Author: Alejandro Quiroz-Zarate

Maintainer: Alejandro Quiroz-Zarate <aquiroz at jimmy.harvard.edu>

Citation (from within R, enter citation("BAGS")):

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("BAGS")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BAGS")

BAGS: A Bayesian Approach for Geneset Selection. PDF R Script

Reference Manual PDF

NEWS Text

biocViews Bayesian, Software

Version 2.34.0

In Bioconductor since BioC 2.13 (R-3.0) (10.5 years)

License Artistic-2.0

Depends R (>= 2.10), breastCancerVDX, Biobase

Imports

System Requirements

URL

Suggests

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Source Package BAGS_2.34.0.tar.gz

Windows Binary BAGS_2.34.0.zip (32- & 64-bit)

macOS 10.13 (High Sierra) BAGS_2.34.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/BAGS

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BAGS

Package Downloads Report Download Stats

Old Source Packages for BioC 3.14 Source Archive