APAlyzer

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see APAlyzer.

A toolkit for APA analysis using RNA-seq data

Bioconductor version: 3.14

Perform 3'UTR APA, Intronic APA and gene expression analysis using RNA-seq data.

Author: Ruijia Wang [cre, aut] , Bin Tian [aut], Chuwei Zhong [aut]

Maintainer: Ruijia Wang <rjwang.bioinfo at gmail.com>

Citation (from within R, enter citation("APAlyzer")):

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("APAlyzer")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("APAlyzer")

APAlyzer: toolkit for RNA-seq APA analysis HTML R Script

Reference Manual PDF

NEWS Text

LICENSE Text

Version 1.8.0

In Bioconductor since BioC 3.10 (R-3.6) (4.5 years)

License LGPL-3

Depends R (>= 3.5.0)

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Follow Installation instructions to use this package in your R session.

Source Package APAlyzer_1.8.0.tar.gz

Windows Binary APAlyzer_1.8.0.zip

macOS 10.13 (High Sierra) APAlyzer_1.8.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/APAlyzer

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/APAlyzer

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Old Source Packages for BioC 3.14 Source Archive