rexposome

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see rexposome.

Exposome exploration and outcome data analysis

DOI: 10.18129/B9.bioc.rexposome

Bioconductor version: 3.13

Package that allows to explore the exposome and to perform association analyses between exposures and health outcomes.

Author: Carles Hernandez-Ferrer [aut, cre], Juan R. Gonzalez [aut], Xavier Escribà-Montagut [aut]

Maintainer: Xavier Escribà Montagut <xavier.escriba at isglobal.org>

Citation (from within R, enter citation("rexposome")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("rexposome")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rexposome")

Dealing with Multiple Imputations HTML R Script

Exposome Data Analysis HTML R Script

Reference Manual PDF

LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews BiologicalQuestion, BiomedicalInformatics, Classification, Clustering, DataImport, DataRepresentation, ExperimentalDesign, Infrastructure, MultipleComparison, Software

Version 1.14.1

In Bioconductor since BioC 3.6 (R-3.4) (6.5 years)

License MIT + file LICENSE

Depends R (>= 3.5), Biobase

Imports methods, utils, stats, lsr, FactoMineR, stringr, circlize, corrplot, ggplot2, reshape2, pryr, S4Vectors, imputeLCMD, scatterplot3d, glmnet, gridExtra, grid, Hmisc, gplots, gtools, scales, lme4, grDevices, graphics, ggrepel, mice

System Requirements

URL

Suggests mclust, flexmix, testthat, BiocStyle, knitr, rmarkdown

Linking To

Enhances

Depends On Me

Imports Me omicRexposome

Suggests Me brgedata

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package rexposome_1.14.1.tar.gz

Windows Binary rexposome_1.14.1.zip (32- & 64-bit)

macOS 10.13 (High Sierra) rexposome_1.14.1.tgz

Source Repository git clone https://git.bioconductor.org/packages/rexposome

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rexposome

Bioc Package Browser https://code.bioconductor.org/browse/rexposome/

Package Short Url https://bioconductor.org/packages/rexposome/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.13 Source Archive