ncdfFlow

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see ncdfFlow.

ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.

Bioconductor version: 3.13

Provides HDF5 storage based methods and functions for manipulation of flow cytometry data.

Author: Mike Jiang,Greg Finak,N. Gopalakrishnan

Maintainer: Mike Jiang <wjiang2 at fhcrc.org>, Jake Wagner <jpwagner at fhcrc.org>

Citation (from within R, enter citation("ncdfFlow")):

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("ncdfFlow")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ncdfFlow")

Basic Functions for Flow Cytometry Data PDF R Script

Reference Manual PDF

README Text

NEWS Text

Version 2.38.0

In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)

License Artistic-2.0

Depends R (>= 2.14.0), flowCore(>= 1.51.7), RcppArmadillo, methods, BH

System Requirements

URL

Suggests testthat, parallel, flowStats, knitr

Linking To Rcpp, RcppArmadillo, BH, Rhdf5lib

Enhances

Depends On Me ggcyto

Suggests Me COMPASS, cydar

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Source Package ncdfFlow_2.38.0.tar.gz

Windows Binary ncdfFlow_2.38.0.zip

macOS 10.13 (High Sierra) ncdfFlow_2.38.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/ncdfFlow

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ncdfFlow

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Old Source Packages for BioC 3.13 Source Archive