SSPA

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.13 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see SSPA.

General Sample Size and Power Analysis for Microarray and Next-Generation Sequencing Data

DOI: 10.18129/B9.bioc.SSPA

Bioconductor version: 3.13

General Sample size and power analysis for microarray and next-generation sequencing data.

Author: Maarten van Iterson

Maintainer: Maarten van Iterson <mviterson at gmail.com>

Citation (from within R, enter citation("SSPA")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("SSPA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews GeneExpression, ImmunoOncology, Microarray, RNASeq, Software, StatisticalMethod

Version 2.32.1

In Bioconductor since BioC 2.4 (R-2.9) (15 years)

License GPL (>= 2)

Depends R (>= 2.12), methods

Imports graphics, stats, qvalue, lattice, limma

System Requirements

URL http://www.humgen.nl/MicroarrayAnalysisGroup.html

Suggests BiocStyle, knitr, rmarkdown, genefilter, edgeR, DESeq

Linking To

Enhances

Depends On Me

Imports Me

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Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package

Windows Binary

macOS 10.13 (High Sierra)

Source Repository git clone https://git.bioconductor.org/packages/SSPA

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SSPA

Package Short Url https://bioconductor.org/packages/SSPA/

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Old Source Packages for BioC 3.13 Source Archive