FamAgg

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see FamAgg.

Pedigree Analysis and Familial Aggregation

Bioconductor version: 3.13

Framework providing basic pedigree analysis and plotting utilities as well as a variety of methods to evaluate familial aggregation of traits in large pedigrees.

Author: J. Rainer, D. Taliun, C.X. Weichenberger

Maintainer: Johannes Rainer <johannes.rainer at eurac.edu>

Citation (from within R, enter citation("FamAgg")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("FamAgg")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FamAgg")

Pedigree Analysis and Familial Aggregation HTML R Script

Reference Manual PDF

NEWS Text

LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Genetics, Software

Version 1.20.0

In Bioconductor since BioC 3.3 (R-3.3) (8 years)

License MIT + file LICENSE

Depends methods, kinship2, igraph

Imports gap (>= 1.1-17), Matrix, BiocGenerics, utils, survey

System Requirements

URL https://github.com/EuracBiomedicalResearch/FamAgg

Bug Reports https://github.com/EuracBiomedicalResearch/FamAgg/issues

Suggests BiocStyle, knitr, RUnit, rmarkdown

Linking To

Enhances

Depends On Me

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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package FamAgg_1.20.0.tar.gz

Windows Binary FamAgg_1.20.0.zip

macOS 10.13 (High Sierra) FamAgg_1.20.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/FamAgg

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/FamAgg

Bioc Package Browser https://code.bioconductor.org/browse/FamAgg/

Package Short Url https://bioconductor.org/packages/FamAgg/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.13 Source Archive