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ldblock
This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see ldblock.
data structures for linkage disequilibrium measures in populations
Bioconductor version: 3.12
Define data structures for linkage disequilibrium measures in populations.
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
Citation (from within R, enter
citation("ldblock")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ldblock")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ldblock")
Reference Manual
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NEWS
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Details
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Software
Version
1.20.0
In Bioconductor since
BioC 3.2 (R-3.2) (8.5 years)
License
Artistic-2.0
Depends
R (>= 3.5), methods
Imports
Matrix, snpStats, VariantAnnotation, GenomeInfoDb, httr, ensembldb, EnsDb.Hsapiens.v75, Rsamtools, GenomicFiles(>= 1.13.6), BiocGenerics(>= 0.25.1)
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Follow Installation instructions to use this package in your R session.
Source Package
ldblock_1.20.0.tar.gz
Windows Binary
ldblock_1.20.0.zip
macOS 10.13 (High Sierra)
ldblock_1.20.0.tgz
Source Repository
git clone https://git.bioconductor.org/packages/ldblock
Source Repository (Developer Access)
git clone git@git.bioconductor.org:packages/ldblock
Bioc Package Browser
https://code.bioconductor.org/browse/ldblock/
Package Short Url
https://bioconductor.org/packages/ldblock/
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