NetSAM
This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see NetSAM.
Network Seriation And Modularization
Bioconductor version: 3.12
The NetSAM (Network Seriation and Modularization) package takes an edge-list representation of a network as an input, performs network seriation and modularization analysis, and generates as files that can be used as an input for the one-dimensional network visualization tool NetGestalt (http://www.netgestalt.org) or other network analysis.
Author: Jing Wang <jing.wang.2 at vanderbilt.edu>
Maintainer: Bing Zhang <bing.zhang at vanderbilt.edu>
citation("NetSAM")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("NetSAM")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("NetSAM")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.