EBcoexpress

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see EBcoexpress.

EBcoexpress for Differential Co-Expression Analysis

Bioconductor version: 3.12

An Empirical Bayesian Approach to Differential Co-Expression Analysis at the Gene-Pair Level

Author: John A. Dawson

Maintainer: John A. Dawson <jadawson at wisc.edu>

Citation (from within R, enter citation("EBcoexpress")):

To install this package, start R (version "4.0") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("EBcoexpress")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBcoexpress")

EBcoexpress Demo PDF R Script

Reference Manual PDF

biocViews Bayesian, Software

Version 1.34.0

In Bioconductor since BioC 2.10 (R-2.15) (12 years)

License GPL (>= 2)

Depends EBarrays, mclust, minqa

Imports

System Requirements

URL

Suggests graph, igraph, colorspace

Linking To

Enhances

Depends On Me SRGnet

Imports Me

Suggests Me dcanr

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Windows Binary EBcoexpress_1.34.0.zip (32- & 64-bit)

macOS 10.13 (High Sierra) EBcoexpress_1.34.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/EBcoexpress

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/EBcoexpress

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Old Source Packages for BioC 3.12 Source Archive