ncdfFlow

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see ncdfFlow.

ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.

Bioconductor version: 3.10

Provides HDF5 storage based methods and functions for manipulation of flow cytometry data.

Author: Mike Jiang,Greg Finak,N. Gopalakrishnan

Maintainer: Mike Jiang <wjiang2 at fhcrc.org>

Citation (from within R, enter citation("ncdfFlow")):

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("ncdfFlow")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ncdfFlow")

Basic Functions for Flow Cytometry Data PDF R Script

Reference Manual PDF

README Text

NEWS Text

Version 2.32.0

In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)

License Artistic-2.0

Depends R (>= 2.14.0), flowCore(>= 1.51.7), RcppArmadillo, methods, BH

System Requirements

URL

Suggests testthat, parallel, flowStats

Linking To Rcpp, RcppArmadillo, BH, Rhdf5lib

Enhances

Depends On Me ggcyto, QUALIFIER

Suggests Me COMPASS, cydar

Links To Me

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Follow Installation instructions to use this package in your R session.

Source Package ncdfFlow_2.32.0.tar.gz

Windows Binary ncdfFlow_2.32.0.zip (32- & 64-bit)

Mac OS X 10.11 (El Capitan) ncdfFlow_2.32.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/ncdfFlow

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ncdfFlow

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Old Source Packages for BioC 3.10 Source Archive