To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pathRender")

In most cases, you don't need to download the package archive at all.

pathRender

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see pathRender.

Render molecular pathways

Bioconductor version: 3.1

build graphs from pathway databases, render them by Rgraphviz.

Author: Li Long <lilong at isb-sib.ch>

Maintainer: Vince Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("pathRender")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pathRender")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("pathRender")
PDF R Script pathRender overview
PDF R Script pathway graphs colored by expression map
PDF Reference Manual
Text NEWS

Details

Version 1.36.0
In Bioconductor since BioC 1.8 (R-2.3) (10 years)
License LGPL
Depends graph, Rgraphviz, RColorBrewer, cMAP, AnnotationDbi, methods, stats4
Imports
LinkingTo
Suggests ALL, hgu95av2.db
SystemRequirements
Enhances
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Windows Binary pathRender_1.36.0.zip
Mac OS X 10.6 (Snow Leopard) pathRender_1.36.0.tgz
Package Downloads Report Download Stats

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