To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("interactiveDisplay")

In most cases, you don't need to download the package archive at all.

interactiveDisplay

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see interactiveDisplay.

Package for enabling powerful shiny web displays of Bioconductor objects

Bioconductor version: 3.1

The interactiveDisplay package contains the methods needed to generate interactive Shiny based display methods for Bioconductor objects.

Author: Shawn Balcome, Marc Carlson

Maintainer: Shawn Balcome <balc0022 at umn.edu>

Citation (from within R, enter citation("interactiveDisplay")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("interactiveDisplay")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("interactiveDisplay")
PDF R Script interactiveDisplay: A package for enabling interactive visualization of Bioconductor objects
PDF Reference Manual

Details

biocViews AnnotationData, Classification, DataRepresentation, GO, GUI, GeneExpression, Genetics, Microarray, Network, QualityControl, Sequencing, Software, Visualization
Version 1.6.0
In Bioconductor since BioC 2.13 (R-3.0) (2.5 years)
License Artistic-2.0
Depends R (>= 2.10), methods, BiocGenerics, grid
Imports interactiveDisplayBase, shiny, RColorBrewer, ggplot2, reshape2, plyr, gridSVG, XML, Category, AnnotationDbi
LinkingTo
Suggests RUnit, hgu95av2.db, knitr, GenomicRanges, GOstats, ggbio, GO.db, Gviz, rtracklayer, metagenomeSeq, gplots, vegan, Biobase
SystemRequirements
Enhances rstudio
URL
Depends On Me
Imports Me RforProteomics
Suggests Me metagenomeSeq
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source interactiveDisplay_1.6.0.tar.gz
Windows Binary interactiveDisplay_1.6.0.zip
Mac OS X 10.6 (Snow Leopard) interactiveDisplay_1.6.0.tgz
Mac OS X 10.9 (Mavericks) interactiveDisplay_1.6.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/interactiveDisplay/tree/release-3.1
Package Short Url http://bioconductor.org/packages/interactiveDisplay/
Package Downloads Report Download Stats

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