To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dagLogo")

In most cases, you don't need to download the package archive at all.

dagLogo

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see dagLogo.

dagLogo

Bioconductor version: 3.1

Visualize significant conserved amino acid sequence pattern in groups based on probability theory

Author: Jianhong Ou, Alexey Stukalov, Niraj Nirala, Usha Acharya, Lihua Julie Zhu

Maintainer: Jianhong Ou <jianhong.ou at umassmed.edu>

Citation (from within R, enter citation("dagLogo")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dagLogo")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("dagLogo")
PDF R Script dagLogo Vignette
PDF Reference Manual
Text NEWS

Details

Version 1.6.0
In Bioconductor since BioC 2.13 (R-3.0) (2.5 years)
License GPL (>=2)
Depends R (>= 3.0.1), methods, biomaRt, grImport, grid, motifStack
Imports pheatmap, Biostrings
LinkingTo
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source dagLogo_1.6.0.tar.gz
Windows Binary dagLogo_1.6.0.zip
Mac OS X 10.6 (Snow Leopard) dagLogo_1.6.0.tgz
Package Downloads Report Download Stats

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