To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TEQC")
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This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see TEQC.
Bioconductor version: 3.1
Target capture experiments combine hybridization-based (in solution or on microarrays) capture and enrichment of genomic regions of interest (e.g. the exome) with high throughput sequencing of the captured DNA fragments. This package provides functionalities for assessing and visualizing the quality of the target enrichment process, like specificity and sensitivity of the capture, per-target read coverage and so on.
Author: M. Hummel, S. Bonnin, E. Lowy, G. Roma
Maintainer: Manuela Hummel <m.hummel at dkfz.de>
Citation (from within R,
enter citation("TEQC")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TEQC")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TEQC")
Follow Installation instructions to use this package in your R session.
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