To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SANTA")
In most cases, you don't need to download the package archive at all.
This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see SANTA.
Bioconductor version: 3.1
This package provides methods for measuring the strength of association between a network and a phenotype. It does this by measuring clustering of the phenotype across the network (Knet). Vertices can also be individually ranked by their strength of association with high-weight vertices (Knode).
Author: Alex J. Cornish and Florian Markowetz
Maintainer: Alex J. Cornish <a.cornish12 at imperial.ac.uk>
Citation (from within R,
enter citation("SANTA")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SANTA")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SANTA")
Follow Installation instructions to use this package in your R session.
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