To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Pviz")

In most cases, you don't need to download the package archive at all.

Pviz

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see Pviz.

Peptide Annotation and Data Visualization using Gviz

Bioconductor version: 3.1

Pviz adapts the Gviz package for protein sequences and data.

Author: Renan Sauteraud, Mike Jiang, Raphael Gottardo

Maintainer: Renan Sauteraud <rsautera at fhcrc.org>

Citation (from within R, enter citation("Pviz")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Pviz")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("Pviz")
PDF R Script The Pviz users guide
PDF Reference Manual

Details

biocViews Microarray, Proteomics, Software, Visualization
Version 1.2.0
In Bioconductor since BioC 3.0 (R-3.1) (1.5 years)
License Artistic-2.0
Depends R (>= 3.0.0), Gviz(>= 1.7.10)
Imports biovizBase, Biostrings, GenomicRanges, IRanges, data.table, methods
LinkingTo
Suggests knitr, pepDat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me Pbase
Suggests Me pepStat
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source Pviz_1.2.0.tar.gz
Windows Binary Pviz_1.2.0.zip
Mac OS X 10.6 (Snow Leopard) Pviz_1.2.0.tgz
Mac OS X 10.9 (Mavericks) Pviz_1.2.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/Pviz/tree/release-3.1
Package Short Url http://bioconductor.org/packages/Pviz/
Package Downloads Report Download Stats

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