To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DeconRNASeq")
In most cases, you don't need to download the package archive at all.
This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see DeconRNASeq.
Bioconductor version: 3.1
DeconSeq is an R package for deconvolution of heterogeneous tissues based on mRNA-Seq data. It modeled expression levels from heterogeneous cell populations in mRNA-Seq as the weighted average of expression from different constituting cell types and predicted cell type proportions of single expression profiles.
Author: Ting Gong <tinggong at gmail.com> Joseph D. Szustakowski <joseph.szustakowski at novartis.com>
Maintainer: Ting Gong <tinggong at gmail.com>
Citation (from within R,
enter citation("DeconRNASeq")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DeconRNASeq")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DeconRNASeq")
Follow Installation instructions to use this package in your R session.
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: