To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BubbleTree")
In most cases, you don't need to download the package archive at all.
This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see BubbleTree.
Bioconductor version: 3.1
BubbleTree utilizes homogenous pertinent somatic copy number alterations (SCNAs) as markers of tumor clones to extract estimates of tumor ploidy, purity and clonality.
Author: Wei Zhu <zhuw at medimmune.com> Michael Kuziora <kuzioram at medimmune.com> Brandon Higgs <higgsb at medimmune.com>
Maintainer: Wei Zhu <zhuw at medimmune.com>
Citation (from within R,
enter citation("BubbleTree")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BubbleTree")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BubbleTree")
Follow Installation instructions to use this package in your R session.
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