To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BADER")
In most cases, you don't need to download the package archive at all.
This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see BADER.
Bioconductor version: 3.1
For RNA sequencing count data, BADER fits a Bayesian hierarchical model. The algorithm returns the posterior probability of differential expression for each gene between two groups A and B. The joint posterior distribution of the variables in the model can be returned in the form of posterior samples, which can be used for further down-stream analyses such as gene set enrichment.
Author: Andreas Neudecker, Matthias Katzfuss
Maintainer: Andreas Neudecker <a.neudecker at arcor.de>
Citation (from within R,
enter citation("BADER")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BADER")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BADER")
Follow Installation instructions to use this package in your R session.
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