To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("methVisual")

In most cases, you don't need to download the package archive at all.

methVisual

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see methVisual.

Methods for visualization and statistics on DNA methylation data

Bioconductor version: 3.0

The package 'methVisual' allows the visualization of DNA methylation data after bisulfite sequencing.

Author: A. Zackay, C. Steinhoff

Maintainer: Arie Zackay <arie.zackay at mail.huji.ac.il>

Citation (from within R, enter citation("methVisual")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("methVisual")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("methVisual")
PDF R Script Introduction to methVisual
PDF Reference Manual

Details

biocViews Classification, Clustering, DNAMethylation, Software
Version 1.18.0
In Bioconductor since BioC 2.6 (R-2.11) (6 years)
License GPL (>= 2)
Depends R (>= 2.11.0), Biostrings(>= 2.4.8), plotrix, gsubfn, grid, sqldf
Imports Biostrings, ca, graphics, grDevices, grid, gridBase, IRanges, stats, utils
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source methVisual_1.18.0.tar.gz
Windows Binary methVisual_1.18.0.zip
Mac OS X 10.6 (Snow Leopard) methVisual_1.18.0.tgz
Mac OS X 10.9 (Mavericks) methVisual_1.18.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/methVisual/tree/release-3.0
Package Short Url http://bioconductor.org/packages/methVisual/
Package Downloads Report Download Stats

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