To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowClust")

In most cases, you don't need to download the package archive at all.

flowClust

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see flowClust.

Clustering for Flow Cytometry

Bioconductor version: 3.0

Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.

Author: Raphael Gottardo <raph at stat.ubc.ca>, Kenneth Lo <c.lo at stat.ubc.ca>, Greg Finak <gfinak at fhcrc.org>

Maintainer: Greg Finak <gfinak at fhcrc.org>, Mike Jiang <wjiang2 at fhcrc.org>

Citation (from within R, enter citation("flowClust")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowClust")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("flowClust")
PDF R Script flowClust package
PDF Reference Manual
Text README
Text NEWS

Details

biocViews Clustering, FlowCytometry, Software, Visualization
Version 3.4.11
In Bioconductor since BioC 2.2 (R-2.7) (8 years)
License Artistic-2.0
Depends R (>= 2.5.0), methods, Biobase, graph, RBGL, ellipse, flowViz, mnormt, corpcor, flowCore, clue
Imports BiocGenerics, MCMCpack
LinkingTo
Suggests parallel
SystemRequirements GNU make
Enhances
URL
Depends On Me flowMerge, flowTrans
Imports Me flowPhyto, flowTrans, flowType, openCyto
Suggests Me BiocGenerics
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source flowClust_3.4.11.tar.gz
Windows Binary flowClust_3.4.11.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) flowClust_3.4.11.tgz
Mac OS X 10.9 (Mavericks) flowClust_3.4.11.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/flowClust/tree/release-3.0
Package Short Url http://bioconductor.org/packages/flowClust/
Package Downloads Report Download Stats

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