To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("derfinderHelper")

In most cases, you don't need to download the package archive at all.

derfinderHelper

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see derfinderHelper.

derfinder helper package

Bioconductor version: 3.0

Helper package for speeding up the derfinder package when using multiple cores.

Author: Leonardo Collado-Torres [aut, cre], Andrew E. Jaffe [aut], Jeffrey T. Leek [aut, ths]

Maintainer: Leonardo Collado-Torres <lcollado at jhu.edu>

Citation (from within R, enter citation("derfinderHelper")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("derfinderHelper")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("derfinderHelper")
HTML R Script Introduction to derfinderHelper
PDF Reference Manual
Text NEWS

Details

biocViews DifferentialExpression, RNASeq, Sequencing, Software
Version 1.0.4
In Bioconductor since BioC 3.0 (R-3.1) (1.5 years)
License Artistic-2.0
Depends R (>= 3.1.1)
Imports IRanges(>= 1.99.27), Matrix, S4Vectors(>= 0.2.2)
LinkingTo
Suggests devtools (>= 1.6), knitcitations (>= 1.0.1), knitr (>= 1.6), knitrBootstrap (>= 0.9.0), rmarkdown (>= 0.3.3), testthat
SystemRequirements
Enhances
URL https://github.com/lcolladotor/derfinderHelper
Depends On Me
Imports Me derfinder
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source derfinderHelper_1.0.4.tar.gz
Windows Binary derfinderHelper_1.0.4.zip
Mac OS X 10.6 (Snow Leopard) derfinderHelper_1.0.4.tgz
Mac OS X 10.9 (Mavericks) derfinderHelper_1.0.4.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/derfinderHelper/tree/release-3.0
Package Short Url http://bioconductor.org/packages/derfinderHelper/
Package Downloads Report Download Stats

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