To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CGHbase")

In most cases, you don't need to download the package archive at all.

CGHbase

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see CGHbase.

CGHbase: Base functions and classes for arrayCGH data analysis.

Bioconductor version: 3.0

Contains functions and classes that are needed by arrayCGH packages.

Author: Sjoerd Vosse, Mark van de Wiel

Maintainer: Mark van de Wiel <mark.vdwiel at vumc.nl>

Citation (from within R, enter citation("CGHbase")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CGHbase")

Documentation

PDF Reference Manual

Details

biocViews CopyNumberVariation, Infrastructure, Microarray, Software
Version 1.26.0
In Bioconductor since BioC 2.3 (R-2.8) (7.5 years)
License GPL
Depends R (>= 2.10), methods, Biobase(>= 2.5.5), marray
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me CGHcall, CGHnormaliter, CGHregions, sigaR
Imports Me CGHnormaliter, plrs, QDNAseq
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source CGHbase_1.26.0.tar.gz
Windows Binary CGHbase_1.26.0.zip
Mac OS X 10.6 (Snow Leopard) CGHbase_1.26.0.tgz
Mac OS X 10.9 (Mavericks) CGHbase_1.26.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/CGHbase/tree/release-3.0
Package Short Url http://bioconductor.org/packages/CGHbase/
Package Downloads Report Download Stats

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