To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BioSeqClass")

In most cases, you don't need to download the package archive at all.

BioSeqClass

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see BioSeqClass.

Classification for Biological Sequences

Bioconductor version: 3.0

Extracting Features from Biological Sequences and Building Classification Model

Author: Li Hong sysptm@gmail.com

Maintainer: Li Hong <sysptm at gmail.com>

Citation (from within R, enter citation("BioSeqClass")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BioSeqClass")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("BioSeqClass")
PDF R Script Using the BioSeqClass Package
PDF Reference Manual

Details

biocViews Classification, Software
Version 1.24.0
In Bioconductor since BioC 2.5 (R-2.10) (6.5 years)
License LGPL (>= 2.0)
Depends R (>= 2.10), scatterplot3d
Imports Biostrings, ipred, e1071, klaR, randomForest, class, tree, nnet, rpart, party, foreign, Biobase, utils, stats, grDevices
LinkingTo
Suggests scatterplot3d
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BioSeqClass_1.24.0.tar.gz
Windows Binary BioSeqClass_1.24.0.zip
Mac OS X 10.6 (Snow Leopard) BioSeqClass_1.24.0.tgz
Mac OS X 10.9 (Mavericks) BioSeqClass_1.24.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/BioSeqClass/tree/release-3.0
Package Short Url http://bioconductor.org/packages/BioSeqClass/
Package Downloads Report Download Stats

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